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    CVE-2026-116742

    HTSlib through 1.24 contains a heap out-of-bounds write and read vulnerability in bgzf_index_load_hfile() in bgzf.c that allows attackers to corrupt heap memory by supplying a crafted .gzi index entry count. A count of 0xFFFFFFFF truncates noffs to zero, causing writes past a malloc(0) buffer and an offs[-1] read in bgzf_useek(), resulting in heap corruption or crashes in tools like samtools and bcftools.

    Published:Oct 26, 2026
    Last Modified:Oct 27, 2026
    EPS:Oct 26, 2026
    EPSS Score:0.00123
    CVSS Score:4.4

    Affected Products

    Vendor
    Htslib
    Product
    Htslib
    Vendor
    Samtools
    Product
    Htslib

    Exploits

    No exploit reference

    Common Weakness Enumeration

    Common Attack Pattern Enumeration and Classification (CAPEC)

    No CAPEC recorded yet

    Related CVEs

    Common Vulnerability Scoring System

    Attack Vector
    Network
    Adjacent
    Local
    Physical
    Privileges Required
    None
    Low
    High
    User Interaction
    None
    Required
    Scope
    Unchanged
    Changed
    Confidentiality
    None
    Low
    High
    Integrity
    None
    Low
    High
    Availability
    None
    Low
    High