OESA-2022-1962

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OESA-2022-1962

Summary: htslib security update

Details: HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM, CRAM and VCF, used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang. HTSlib implements a generalized BAM index, with file extension .csi ( coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent. Security Fix(es): HTSlib through 1.10.2 allows out-of-bounds write access in vcf_parse_format (called from vcf_parse and vcf_read).(CVE-2020-36403)

References: https://www.openeuler.org/en/security/safety-bulletin/detail.html?id=openEuler-SA-2022-1962, https://nvd.nist.gov/vuln/detail/CVE-2020-36403